rs31426388 SNP Detail

Summary

• ID
  rs31426388
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115571364 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCACAAAAC AATCTCCACA
  ACCCATTATC CATATTTAAC AGAAGTTTGG AGAGGACCGT AGCATCACCA GAGAAAACAT
  CCAGGGCTTG CCATCCCCAC GTCTCATTAC TTAGAGGGAG TGATGGCTCC ATCCTGGAGC
  AGAGGCACCT CTCCAGTCAG AATAATCACT CTGTAGATAC TGCCTGTGGT CTACCTACTG
  M
  CTGGGTATCA GAGCAGCCTC GGGGACAGTG TACTTCAGCT GAGCAGGGGC TGGGATGTGC
  CAGGAGTTGG CGAAACACTG GGACCTCAGC TTCTCACTGA GGAGTTCCCA GCACAAGGAC
  TGTGAGAGGA GGGAGAGAAA AGTGTCCCTC CCTCCTCACC GAGTCAGCCA CCGACACAGT
  TCAAAGTATC TTTTGATGAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45532141	mCV24999920	ABI	CRAMUS_MOUSE	f	SNP	A	C	C
ss135665597	ENSMUSSNP5011196	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
ss320893278	CHEV_3_115480633	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31426388					SNP	A	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115571364 () rs orientation: forward

Symbol	Name	Function Class
Rr583598	regulatory region 583598	1536 bp proximal