rs31426659 SNP Detail

Summary

• ID
  rs31426659
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:69629537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCGGTTCTC CTATCGCGAG
  ATCTTCGTAG GTGTGTAGCG CGGCTGAGGT AGCCGGTAGT GCGTCCTGGC CGGCGGGTTG
  CCCGCTGTGG GTGTATTTCG CCCTGTCACG GAGCTGCTGG TAGGTTCTGG GTGGGAGACC
  CGGCTCCTGC GCCAACAGCG GCCAGACGAG GGAGCGAGCC GGGCCCTGTA CCCGGGCTGC
  R
  AGCGGCCCGC ACGGGCGCCG GGGCGTGGGT GTGGGGCCGA GGCCGGCCGC ATGCGGAGCC
  GCGGCGCGGA GGAGGGCGGA AGGGCCGTGC TGGGCGGCGG CTCGCGACCC CCGGGCTTGT
  GTGCCGCACG CATGGCTGTC CCCGAACTCA GGAGACTCGA CCTGATGGAT CCAAGTCTCA
  CCGGTCCTTC CCTCCCCTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45533013	mCV24614654	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31426659					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69629537 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13262	CpG island 13262	within coordinates
Nmd3	NMD3 ribosome export adaptor	within coordinates
Rr77744	regulatory region 77744	within coordinates
Rr397719	regulatory region 397719	69 bp downstream
Tssr29546	transcription start site region 29546	133 bp downstream
Tssr29547	transcription start site region 29547	103 bp downstream