rs31432969 SNP Detail

Summary

• ID
  rs31432969
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:157658090 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTA TTACTTTTAG TTATGTGTCT
  R
  TGAGTGTTTG TCTTGTCTAT CTATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45534217	mCV23297023	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	A
ss136135325	ENSMUSSNP2423314	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
ss321034816	CHEV_3_157615417	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31432969					SNP	G	G	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:157658090 () rs orientation: forward

Symbol	Name	Function Class
Ankrd13c	ankyrin repeat domain 13c	within coordinates
Rr66599	regulatory region 66599	911 bp proximal
Rr66600	regulatory region 66600	1711 bp proximal
Rr71372	regulatory region 71372	1111 bp proximal
Rr71373	regulatory region 71373	1911 bp proximal
Rr80063	regulatory region 80063	1890 bp distal
Rr80064	regulatory region 80064	within coordinates