rs31433355 SNP Detail

Summary

• ID
  rs31433355
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:59039576 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTTTTTTTTT GCTCTCCAGT TGTACTCTGG ATTAACACAA TACCACACCA TCTCTCTGTA
  CCATTATGCC GAGGTTCCTC CATGTGCTTA AGCCAACTTT GAATGCTTCC ACCCAGCACT
  GGACCTGGAG CATTTTCTCT GGTCTTTCTT AGATTTCTCT CTCTTTTTTT TTTGGTCTCA
  CCATTTTCCC CTCCCGCCCA ACTCTGTCTT ACCGAATCAA AAGTAAAAGT TCCTCAAACT
  GTCTCGTATC TCCTAAGCAA CTATCAAACT GTTCTTCTAG CATCCTTTGC AGATGCATTA
  R
  AAAATAGTTC CTGTGTGCTG TCTTCACTTC CCTTCTACCT TGTAATCTAT TTTCCTGTGT
  GACTTCATGG AAACTGCACA AATCCAGCCC CACTACCCAT TGCTCAGCCT ACTCGTTATT
  TTTAAAAGAT ATATAAAGGC AGCATTTGTT TTTTAATTGT GAAAGTGCAC ACAAATGTTC
  TGTCTTGACC TGTTTTCTTT TCTGAAATAA CCCTGTTGTG AGTTTCAGGC TCACCTGGAC
  TTCCTGTAGG AGCTCAGCAG CCTCAGAGCT TGTAGTCCTT GTGTCTTTGT ACTTGTGGAT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45533221	mCV24979401	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31433355					SNP	G	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:59039576 () rs orientation: forward

Symbol	Name	Function Class
Med12l	mediator complex subunit 12-like	within coordinates
P2ry14	purinergic receptor P2Y, G-protein coupled, 14	within coordinates
Tssr29228	transcription start site region 29228	289 bp downstream
Tssr29229	transcription start site region 29229	140 bp upstream
Tssr33381	transcription start site region 33381	1612 bp upstream
Tssr33382	transcription start site region 33382	1552 bp upstream
Tssr33383	transcription start site region 33383	1527 bp upstream
Tssr33384	transcription start site region 33384	1515 bp upstream
Tssr33385	transcription start site region 33385	1495 bp upstream
Tssr33386	transcription start site region 33386	1464 bp upstream
Tssr33387	transcription start site region 33387	1391 bp upstream
Tssr33388	transcription start site region 33388	1074 bp upstream
Tssr33389	transcription start site region 33389	1061 bp upstream
Tssr33390	transcription start site region 33390	1014 bp upstream
Tssr33391	transcription start site region 33391	916 bp upstream