rs31437282 SNP Detail

Summary

• ID
  rs31437282
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:173153553 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGCTAAGAA GATCTGGTGA TTACGGACTC
  TGGAGAGCTA TGTCCCTGGA TCCAAATACG CCCAATGCAG TTCAGTGGAA ACCTGAGTAA
  ACCTGATTag gaaggtagga aggaaggaag gaagaatgga agaaaggaag aaaggaaggG
  Y
  CTGGATGGGT CAGATATAAT ATTGTCAATA ATTACAAATT TTCTTTCTTT ATCACCAATA
  TCTCTCATGA TTGCTTGACA GGTACATTCT ATAAAGGAAG TTAATTATAC CCATTATGTG
  CCTAAAAACA TTAACCTGAC CAAGTACCTA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45033808	mCV23111361	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss146220279	ENSMUSSNP4349328	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
ss320131719	CHEV_1_175256117	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31437282					SNP	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:173153553 () rs orientation: forward

Symbol	Name	Function Class
Rr423669	regulatory region 423669	1860 bp distal
Rr423670	regulatory region 423670	1980 bp distal
Rr423671	regulatory region 423671	70 bp distal