rs31437610 SNP Detail

Summary

• ID
  rs31437610
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:12571032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTGA GCAGAGCATC ACTTTTCAAA
  R
  CCAAATGTGA TATCTCAGCT AGAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46032623	mCV23046818	ABI	CRAMUS_MOUSE	f	SNP	A	A				G		A
ss51469406	NES13983774	PERLEGEN	MM_PANEL2	f	SNP		A	G	A	A		G	A		G	A	G		G
ss148340707	ENSMUSSNP1155326	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A						A
ss322106509	CHEV_7_13422454	CHEVERUD	SCREENING_POP	f	SNP									G				A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31437610					SNP	A	A	G	A	A	G	G	A	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51469406	NES13983774	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:12571032 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18318	CpG island 18318	1686 bp distal
Rr642385	regulatory region 642385	1612 bp distal
Rr642386	regulatory region 642386	1258 bp distal
Tssr64481	transcription start site region 64481	1844 bp downstream
Tssr64482	transcription start site region 64482	1151 bp downstream
Zfp110	zinc finger protein 110	within coordinates