rs3144019 SNP Detail

Summary

• ID
  rs3144019
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:118221465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTTT GGTTTGGTTT TTTGGTTTTT
  T
  GAGACAGGGC TTCTCTGTAT AGCCC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147298245	ENSMUSSNP5612934	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs3144019					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118221465 () rs orientation: forward

Symbol	Name	Function Class
Eif2ak4	eukaryotic translation initiation factor 2 alpha kinase 4	Intron
Rr563227	regulatory region 563227	1862 bp distal
Rr563228	regulatory region 563228	1513 bp distal