rs3144186 SNP Detail

Summary

• ID
  rs3144186
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118416130 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AGCAC TGGTCTCTTC CAGAGGACTC
  R
  GGTTTGATTC CCATCACCCA TATGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147305611	ENSMUSSNP3270206	ENSEMBL	ENSEMBL_Sanger	r	SNP	T	T
ss320470519	CHEV_2_118411385	CHEVERUD	SCREENING_POP	r	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs3144186					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118416130 () rs orientation: reverse

Symbol	Name	Function Class
Rr563272	regulatory region 563272	405 bp proximal