rs31444217 SNP Detail

Summary

• ID
  rs31444217
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:76129664 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGTGAAGC CCTGGATTCA
  GTTCGGAGTA CTCCGGTCTG TAGTTTGGCA GCAGTTACCT GTAGTCTTGG TCACTCAGGA
  GGCTAAGGCA CAAGTTTGGC ATGAGCCTGG GTACTTAGGG CTGCCTAGGC AATACAGGAA
  GACTTTGTCT CAAACAGCAA ACAGAAGTAC CCTGGTTTTC TTTGCTGTCT GTGCCCAGTC
  R
  ACTACCCGGC ATCCATTTGT AACGCAAGCA TGTGCAACTG GAACTCACAC GTGGGAGTGT
  TTCATTTCAA CTTATTAAGC TTGCAAGCCA AGGCTTGCTC GGCTTTCTGA CGGATCTGTG
  TAGGTGGGTA ACAGAATGAG CTCAGAGCTG GCGGTTTGAT GCTGTTAAGG TTCCACCTGC
  CAACGCTGTC TGAGAATACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49239567	NES12515006	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31444217					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49239567	NES12515006	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:76129664 () rs orientation: forward

Symbol	Name	Function Class
Gm52138	predicted gene, 52138	92 bp upstream
Gm62917	predicted gene, 62917	578 bp upstream
Rr296309	regulatory region 296309	within coordinates
Rr300347	regulatory region 300347	371 bp proximal