rs31444221 SNP Detail

Summary

• ID
  rs31444221
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:76128434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGATCAGGCT CATCTCCAAC TCAGAGATCC GTCTGCCTCT
  ATTCCTGCTT CCTAAGTGCT GGGATCAAAG GGTGTGTGCC GCTACACCCA TCTGTGATTC
  R
  TATTTTTTAG ACAACCTGAA TTCTTTTTCT TTCTCTCCCC TCACCCTGTA AGAACTAACT
  GAAAGAGCCT TGAGGAGGAC AGGACCAAGA AACCACTGTG                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ
ss49239571	NES12515058	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ
rs31444221					SNP	G	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49239571	NES12515058	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:76128434 () rs orientation: forward

Symbol	Name	Function Class
Gm52138	predicted gene, 52138	1322 bp upstream
Gm62917	predicted gene, 62917	within coordinates
Rr296309	regulatory region 296309	1082 bp proximal
Rr300347	regulatory region 300347	1601 bp proximal