rs31444529 SNP Detail

Summary

• ID
  rs31444529
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:128677405 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATCA CTGCCTGGTG CCAATTTCCC
  Y
  ACACAGTGTG CTCTCTTGAA AAAGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45034247	mCV25298200	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss145468731	ENSMUSSNP7132215	ENSEMBL	ENSEMBL_Sanger	f	SNP			T
ss319966907	CHEV_1_130646245	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31444529					SNP	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:128677405 () rs orientation: forward

Symbol	Name	Function Class
Gm29599	predicted gene 29599	1258 bp upstream
Gm70593	predicted gene, 70593	within coordinates
Tssr8546	transcription start site region 8546	1968 bp downstream