rs31445439 SNP Detail

Summary

• ID
  rs31445439
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:20748822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGAA GAAGAAGAAG AAGAAGAAGA
  W
  GAAGAAGAAG ATGAAGAAGA AGAAG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45034800	mCV23184356	ABI	CRAMUS_MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs31445439					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:20748822 () rs orientation: forward

Symbol	Name	Function Class
Lincmd1	long intergenic non-protein coding RNA of muscle differentiation 1	within coordinates
Mir206	microRNA 206	412 bp upstream
Mirc37	microRNA cluster 37, including Mir133b through Mir206	412 bp proximal