rs3144715 SNP Detail

Summary

• ID
  rs3144715
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118415100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCCG GTGGACATGG GAGAACTGCC
  K
  GACACTTTCC ATGTAGCCCC GGATG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46471111	mCV22885690	ABI	CRAMUS_MOUSE	r	SNP	C	C	A	C
ss147305552	ENSMUSSNP3776682	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss320470508	CHEV_2_118410355	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs3144715					SNP	G	G	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118415100 () rs orientation: forward

Symbol	Name	Function Class
Rr563272	regulatory region 563272	1435 bp proximal