rs3144722 SNP Detail

Summary

• ID
  rs3144722
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118418692 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGT TATGGAACCT TTAAGGAATG
  R
  AGCCTTGCTG GAGAAAGTAT GTCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46469882	mCV22885654	ABI	CRAMUS_MOUSE	r	SNP	T	T	T	C	T
ss147305666	ENSMUSSNP4480501	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
ss320470532	CHEV_2_118413947	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs3144722					SNP	A	A	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118418692 () rs orientation: forward

Symbol	Name	Function Class
Rr563272	regulatory region 563272	1820 bp distal