rs31457945 SNP Detail

Summary

• ID
  rs31457945
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:76986999 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTAA GAGGTCAAAC GTGAATTGCA
  M
  TGAAGGTCCT ACAAAGTCAT GAAAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39320209	mCV24099855	ABI	CRAMUS_MOUSE	f	SNP		A	C					A
ss48054345	NES12078628	PERLEGEN	MM_PANEL2	f	SNP	A		C	A	C	A	C		C	A	C	A		C	A	C		C
ss148168483	ENSMUSSNP996125	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C
ss325022900	CHEV_15_76933229	CHEVERUD	SCREENING_POP	f	SNP													C				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31457945					SNP	A	A	C	A	C	A	C	A	C	A	C	A	C	C	A	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48054345	NES12078628	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:76986999 () rs orientation: forward

Symbol	Name	Function Class
Rbfox2	RNA binding protein, fox-1 homolog (C. elegans) 2	within coordinates
Rr390941	regulatory region 390941	within coordinates
Rr504944	regulatory region 504944	1405 bp proximal