rs31463549 SNP Detail

Summary

• ID
  rs31463549
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191569246 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGCC AAGCCTTGAG GGAGCAGAGC
  R
  CTCACTGAGG TAAGGCAGGA GAGAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45035839	mCV23985476	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss146510995	ENSMUSSNP4834695	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320196168	CHEV_1_193661013	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31463549					SNP	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191569246 () rs orientation: forward

Symbol	Name	Function Class
Rr426232	regulatory region 426232	1835 bp distal
Rr426234	regulatory region 426234	617 bp proximal
Rr426235	regulatory region 426235	1695 bp proximal