rs31464485 SNP Detail

Summary

• ID
  rs31464485
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:75682382 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAACACGA GCTCGAAGTT
  CTGTATAATT CAGAGTAGGC TGTGGTGTGT AGACGAGGCT TCAAGAGCAA AGGCTTCCTT
  GAGTCTGTGA GTCACAGCTT TTCATTTCAC GAGTATCAGC CTGTCCGCGT GGGTGGCTGC
  CCTTTCTTCT CTTCCACTCC ATCTCTGAGG GACCTGGGGA CCCATCCCTT TCAGGGTAGG
  Y
  TCTTGCCTCC TGGGGAGCCC TGACTCAGCT CTTCTGCTCT CTCAGCAGCC CCTGCTCAGG
  CCTGTCTTCC TCAGGGGAGC CTGCTCTCTT GTTCCCTGCC CTGACACATC TTGAGAGCAC
  TCTCTGAAGC TGTTCTCTTT CCTTCCAGTT CCTGCCTTCA TCCTTTCCTC TACCAAAGAA
  AGGATTTGTG GGAGTCAAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49243311	NES12530786	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31464485					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49243311	NES12530786	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:75682382 () rs orientation: forward

Symbol	Name	Function Class
Rr369875	regulatory region 369875	735 bp upstream
Tssr126680	transcription start site region 126680	1725 bp upstream