rs31464489 SNP Detail

Summary

• ID
  rs31464489
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:75682204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAGAGCAA GGAGCTGAGG
  TCCCAGAAGC TGGCCTCCCT GCCTCTGCCC TTCTAAGTGT GACTCACACG AGACAACAGT
  GAACAGCAAA CCTGGCTTCA GATCCATGCT CCCCTGACCG GCCTGACTCT CAGCCTCATC
  CTGACGTAGA CGCATTTCAT AAAACGATTC TGTCTTGGCT GAACACGAGC TCGAAGTTCT
  K
  TATAATTCAG AGTAGGCTGT GGTGTGTAGA CGAGGCTTCA AGAGCAAAGG CTTCCTTGAG
  TCTGTGAGTC ACAGCTTTTC ATTTCACGAG TATCAGCCTG TCCGCGTGGG TGGCTGCCCT
  TTCTTCTCTT CCACTCCATC TCTGAGGGAC CTGGGGACCC ATCCCTTTCA GGGTAGGTTC
  TTGCCTCCTG GGGAGCCCTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49243315	NES12530782	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	T	T	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31464489					SNP	G	G	G	G	G	G	T	G	G	G	T	T	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49243315	NES12530782	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:75682204 () rs orientation: forward

Symbol	Name	Function Class
Rr369875	regulatory region 369875	913 bp upstream
Rr495471	regulatory region 495471	within coordinates
Rr495472	regulatory region 495472	508 bp proximal
Tssr126680	transcription start site region 126680	1903 bp upstream