rs31465351 SNP Detail

Summary

• ID
  rs31465351
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:52247018 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGC GAGCCGGGTC CTGGAGTCCC
  R
  CTGACACCTG GTCCGTTGGA GTAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39292095	mCV24785380	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss139499016	ENSMUSSNP4501703	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss324626574	CHEV_14_52629236	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31465351					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52247018 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6435	CpG island 6435	within coordinates
D14Mit183	DNA segment, Chr 14, Massachusetts Institute of Technology 183	655 bp proximal
Rr369820	regulatory region 369820	714 bp downstream
Rr369821	regulatory region 369821	430 bp downstream
Tssr128467	transcription start site region 128467	849 bp upstream
Tssr128468	transcription start site region 128468	668 bp upstream
Tssr128469	transcription start site region 128469	575 bp upstream
Tssr128470	transcription start site region 128470	357 bp upstream
Tssr128471	transcription start site region 128471	58 bp downstream
Tssr128472	transcription start site region 128472	90 bp downstream
Tssr128473	transcription start site region 128473	1287 bp downstream
Tssr128474	transcription start site region 128474	1307 bp downstream
Zfp219	zinc finger protein 219	within coordinates