rs31466063 SNP Detail

Summary

• ID
  rs31466063
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104467396 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGGTCAGCCT CAGAGGAAGG AAGAGAATAG ACCTTGATGG CTAGCCTTAG GAATACAGTA
  TAAGGGTTTT TAGCAAGGAA GAAGGAATGG GGAAAGGGCA AGGCCTGCCA GAGTCATGTT
  TGCCATGCTC AGCCAGCTAG AATCCCTTCG GTATTGTCAA AAGAGAAGCT TTGTTAAAAA
  AAAAAAAGAA AGAAGAAGGA GGAGGAGGAG GAGGAAGAGG AGGAGGAGGA AGAGGAGGAG
  GAGAGAGAAA GAAAGAAAGA AAGAAAGAAA GAAAGAAAAG GGAAAAGAAA AGAAAAGAAA
  R
  GAAAAGAAAA GAAAAGAAAA GAAAGGATAT ATATTTAATC TTCATGGGTG TGTTACCTAG
  ACTTGTTACT TTCAAGACTG TTGTCTTGAA AAAGGGAGAC TCTGAGGTCA GGTGTGGTGG
  ACCAAGCCGG CACTGGCAAG GCAGAGGCAG AAGGATCTTT GTTAGTCCAG GATCTATGTG
  CTCCAGGACA ACCAGGACTA CATTAGAGAC CTTGTCTCAA ACAACAGCAA AAAGAAACAC
  CACCACCACC ACCACCACCC CCCAAAAAAA AGAGAAAAGG GAAGAAAGTA GCAATGGAAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss45536375	mCV22703876	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs31466063					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104467396 () rs orientation: forward

Symbol	Name	Function Class
Rr582541	regulatory region 582541	1522 bp proximal