rs31466431 SNP Detail

Summary

• ID
  rs31466431
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:75681393 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTGTGAG AATATTTCTT
  GGGAGTTGGG GTGCTGGCTC AGTCAGAAAA AGTACCTGCC AGAAAAACCG CCCAAGGAAC
  TGTTTGAATT CCCTCTCCCC CCAGTACACT CATGAGAGCC AGGGGAGGTG GGGGATGAGG
  TGGGAGGAGA CAAGGGGAGC TCACTGGTCC CTAGCCCAGC TAAAGCAGTG AGCTCCAGCT
  Y
  GGGGAGAGAG CCTGACTCAA AAACCAAGGT GAAGAGCAAT CAAGGAAAGC CTTCATTGCT
  GACCTCCAGC TTCCACGTGG ACATGCACAG GCACACATGT GCATGCTACA CACACAAATT
  AAAAATTAAA AAGAAAGCAC TGCTTGATAA GATTACCGCA TAAAAGACAG TGGTGGGTCC
  ATAGTATGGG TCGGTTTCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss49243337	NES12530757	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs31466431					SNP	C	C	C	C	C	C	T	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49243337	NES12530757	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:75681393 () rs orientation: forward

Symbol	Name	Function Class
Rr369875	regulatory region 369875	1724 bp upstream