rs31468414 SNP Detail

Summary

• ID
  rs31468414
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:120233344 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAACTTAT AGAGTCCACC
  TCCAGTAGAA AAGCAGGACA TCAAGTGGAG GGATGGGGTT GCCATCCCAC AATCAAAAAC
  TCTGACCCAG ATCGTCCCTG TCTAAAAGAA CTGCAGGGAC AAAAATGGAG AACAGACTGA
  AGGAAAAGAG GTTCAGTGGC AGGCCCAAAT TTGGATCCAG CTCAAGGGGA GGCTCCAAGG
  M
  CTGACACTAC CCTCAGAGAG GCCCAACAAG CAGCTGACTG AGACAGAAGC AGATAGTTAC
  ACCCAACCAT TAGACTGAAG TCGGAGACCC CTGCGGTTGA ATTAGGGGAA AGACTGGAAG
  AAGCTGAGGA GGAGGAGGGC AACCCCATAG CAAGACCAAC AACAGTCTCA ATTAACCTGA
  ACCCCTGAGT TCTCTCAGAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46034979	mCV22887055	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	A
ss145823098	ENSMUSSNP7173389	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31468414					SNP	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:120233344 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19646	CpG island 19646	582 bp proximal
Gm45112	predicted gene 45112	within coordinates
Rr654734	regulatory region 654734	1278 bp distal
Rr654735	regulatory region 654735	1393 bp distal
Rr654736	regulatory region 654736	565 bp proximal
Rr654737	regulatory region 654737	1066 bp proximal
Tssr68788	transcription start site region 68788	1079 bp upstream
Uqcrc2	ubiquinol cytochrome c reductase core protein 2	1068 bp upstream