rs31468732 SNP Detail

Summary

• ID
  rs31468732
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165915533 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATACACCAAA GTCTCGGAAG ATATCCCAGT TGGTGGAGTA CTTACCCAGC AACTCTTACT
  GGAGGCCCTG AGTCTGATCC TTAGCCCAGA ATAAAACTGA GCATGGTGGT ACAACCCTGT
  ACAGCCAGCA CTTGGAAGGT GGAAGTAGGT GTATCAGAAG TAAAAGATCA TCAGTGGCTA
  TATAGTGAGT TCAAAGCCAG CCTGGAATAC ATAAGACCCT GTCTCAAAAC AAAATCATAT
  CTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCTAT CCATTCACCC ATTTATCTAT
  Y
  CATCCATCCA TTTATCTATT CATCCATCCA TTCATCCATC CATCCATCCA TCCATGTATC
  TGTTATCTAT CTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCCAT TCACCCATCT
  ATCTATTCAT CCATCTATTC ATCCATCCAT CCATCCATGT ATCTGTTATC TATCTATCCA
  TCCACCCATC TATCTATTCA TCCATCCATC CATCTGTCCA TCCATCCATC CATCCATCCA
  TCCATCCATC CATCTATCTA TTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCTAT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45036506	mCV22723364	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31468732					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165915533 () rs orientation: forward

Symbol	Name	Function Class
Rr422527	regulatory region 422527	682 bp proximal
Rr422528	regulatory region 422528	1757 bp proximal