rs31468837 SNP Detail

Summary

• ID
  rs31468837
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:67197307 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGA TAGCTTTGGT TTGGCTGTAC
  R
  GCCAATAAAT AAGCTCTCAG GAAGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45036300	mCV24327036	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss144538392	ENSMUSSNP230523	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss319761949	CHEV_1_67204722	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31468837					SNP	A	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:67197307 () rs orientation: forward

Symbol	Name	Function Class
Cps1	carbamoyl-phosphate synthetase 1	within coordinates
Tssr7206	transcription start site region 7206	1923 bp downstream
Tssr7207	transcription start site region 7207	1245 bp downstream
Tssr7208	transcription start site region 7208	325 bp downstream
Tssr7209	transcription start site region 7209	1234 bp upstream
Tssr7210	transcription start site region 7210	1273 bp upstream
Tssr7211	transcription start site region 7211	1285 bp upstream