rs3147192 SNP Detail

Summary

• ID
  rs3147192
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:83465184 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CAGAA ATCCGCCTGC CTCTGCCTCC
  T
  GAGTGCTGGG ATTAAAGGCG TGCGC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132470740	ENSMUSSNP961155	ENSEMBL	ENSEMBL_Sanger	r	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs3147192					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:83465184 () rs orientation: reverse

Symbol	Name	Function Class
Ccl9	C-C motif chemokine ligand 9	within coordinates
Rr452989	regulatory region 452989	1707 bp distal
Tssr103714	transcription start site region 103714	289 bp upstream
Tssr103715	transcription start site region 103715	330 bp upstream
Tssr103716	transcription start site region 103716	992 bp upstream
Tssr109677	transcription start site region 109677	674 bp upstream
Tssr109678	transcription start site region 109678	293 bp upstream
Tssr109679	transcription start site region 109679	9 bp upstream
Tssr109680	transcription start site region 109680	231 bp downstream
Tssr109681	transcription start site region 109681	353 bp downstream
Tssr109682	transcription start site region 109682	622 bp downstream
Tssr109683	transcription start site region 109683	673 bp downstream
Tssr109684	transcription start site region 109684	699 bp downstream
Tssr109685	transcription start site region 109685	744 bp downstream
Tssr109686	transcription start site region 109686	807 bp downstream
Tssr109687	transcription start site region 109687	856 bp downstream
Tssr109688	transcription start site region 109688	903 bp downstream
Tssr109689	transcription start site region 109689	946 bp downstream
Tssr109690	transcription start site region 109690	959 bp downstream
Tssr109691	transcription start site region 109691	969 bp downstream
Tssr109692	transcription start site region 109692	1000 bp downstream
Tssr109693	transcription start site region 109693	1111 bp downstream
Tssr109694	transcription start site region 109694	1505 bp downstream
Tssr109695	transcription start site region 109695	1555 bp downstream