rs31473876 SNP Detail

Summary

• ID
  rs31473876
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144101817 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAGC TAACAAGATT CGCATGCTTG
  R
  CCCCTGCTAT TTTTCCAGGA AGCAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45537109	mCV24080587	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss136030714	ENSMUSSNP3810507	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31473876					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144101817 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13898	CpG island 13898	516 bp proximal
Gm65349	predicted gene, 65349	within coordinates
Rr586642	regulatory region 586642	564 bp distal
Rr586643	regulatory region 586643	412 bp proximal
Rr586644	regulatory region 586644	663 bp proximal