rs31478204 SNP Detail

Summary

• ID
  rs31478204
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83018299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCACT GATTGTTCTG GAGTCAGGAG
  K
  GGGAGGGGAG GAGGAAGAGG AAGAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45536779	mCV25188538	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	G	T
ss135411404	ENSMUSSNP5910032	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		T
ss320821088	CHEV_3_82914914	CHEVERUD	SCREENING_POP	f	SNP						T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31478204					SNP	G	G	G	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83018299 () rs orientation: forward

Symbol	Name	Function Class
Rr578836	regulatory region 578836	375 bp distal
Rr578837	regulatory region 578837	611 bp distal
Rr578838	regulatory region 578838	1871 bp proximal