rs31478483 SNP Detail

Summary

• ID
  rs31478483
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171488980 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGA GTTGTCATAG TCATTTGGCT
  K
  TCTAAAGCGA GATGCAATAA AATGG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45037663	mCV24408125	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss120001888	PARCsnp_1.15021	PARC_SEQ	INBRED	f	SNP			T	G
ss120004187	PARCsnp_1.04362	PARC_SEQ	INBRED	f	SNP			T	G
ss146171869	ENSMUSSNP375349	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss320120236	CHEV_1_173591543	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31478483					SNP	G	G	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171488980 () rs orientation: forward

Symbol	Name	Function Class
Gm70589	predicted gene, 70589	within coordinates