rs31478913 SNP Detail

Summary

• ID
  rs31478913
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:67878326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             GGCCAGGAGC AGCAACTTTA GTGGGTGTGC TATAAAGCCC ACTCCCGGGC
  Y
  GGAAATCCCA AAGTGGAGTA GAGCTGACCC TACAGTGGCC CTAGAGCCCC           
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46037316	mCV25449876	ABI	CRAMUS_MOUSE	f	SNP	C	T	C					C		C
ss51900542	NES14913235	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	C	C		C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31478913					SNP	C	T	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51900542	NES14913235	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:67878326 () rs orientation: forward

Symbol	Name	Function Class
Igf1r	insulin-like growth factor I receptor	within coordinates
Tssr67118	transcription start site region 67118	1987 bp downstream
Tssr67119	transcription start site region 67119	1923 bp downstream
Tssr67120	transcription start site region 67120	456 bp downstream
Tssr67121	transcription start site region 67121	1717 bp upstream