rs31480224 SNP Detail

Summary

• ID
  rs31480224
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:51105369 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTGAGGCACA ACTTTGTTAT GATAATCATG CTGGATTTCT TCTTGATCAG AGGCTTTCTA
  GAGGCAAGAT CTATTACCCA GAATCACTAG ATATTTGATA AGAATAAAGA TGCCAATGAA
  AACAGCCCTG AGGTAAAGAG TACTTCAGAA AGGTCATGAG AGACTCAGTA ATAGAGTGCC
  TACCTACCAT GTGCATGCCT CTGGGTTCAA TTCCTAGAAC TATCCAAAAA AACCCAAAAG
  GCTGATACCA AAAATGCCGA GAAAAGAAGG TCCCCAGACA CAGATCATCA GAGGTGGAAA
  M
  TAAGGCACTG AAATCAATCT ACTAACAGAA CATATAGCAA AAAAAAGGCT AGAGTCAAGA
  TGAGCACCCA AAAGCAAATA CCAAGGCTAC TTCCTGGACT TGAGCTGTAG CAGACATGGA
  TTTCAGGGCC CTGGGTCCAG GTGGAAGGTC TAGTTCCTCA GAGAAACATG GAGTCTTCTT
  GGTAGGAAGC TCAGGGAGCA GGCAGTTGCT AGTTTTCAGG CTATGCAGAT CAGCTTGTGC
  CGTATGAGAT ATGTGAAGAC CCTGGAGCAA GGGGCTGGTC AATGCAGTGC TCTTTACAGT
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39293409	mCV25320700	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31480224					SNP	C	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51105369 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Tep1	telomerase associated protein 1			Intron
				Noncoding-Transcript-Variant
Tssr128379	transcription start site region 128379			1438 bp downstream