rs31480518 SNP Detail

Summary

• ID
  rs31480518
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:56633054 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT CAGCTCATCC CTCCAGGTTC
  Y
  TGGCCTAATT GAGTTCTTGT CCTGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45537469	mCV23384127	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	T
ss135195090	ENSMUSSNP3142418	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
ss320778038	CHEV_3_56529555	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31480518					SNP	T	T	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:56633054 () rs orientation: forward

Symbol	Name	Function Class
Rr75870	regulatory region 75870	723 bp distal
Rr375010	regulatory region 375010	within coordinates