rs31481737 SNP Detail

Summary

• ID
  rs31481737
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:24470840 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTGAATAA TAGCAAGTTT
  CAAGTTCAGT GACAGACTCT GTCTCAAAAA ATGTGATGGA GGGTAAAGAC ATCTCCTATG
  TGCACTCACT GGTGAGCACA CCCACATATA TGCATCACAC ACATGCCACA CATGCACTTA
  GCCTTATTCT ACCAGGCATT TTGCCCAGCA CAGGGGCACA AGGCTGTAAT CCCAGAAGTG
  Y
  TTAGAGGGCC GAGGCATGAG AGGCCAGCTT GCTCTGGTGA GTTCTCAGCC AGGCCCTCAG
  CAAGGCCCTC AGTCAGGCAG GCAGGCAGGC AGGCAGGCAG GCAGGCAGGC AGGCAGGAAG
  ACAGACAGGC AGACAGACAT CATGCTTCTG TGTGTATTGA CATAGTTTTT GAGCTGCAGA
  TAGGCCAGTA TTTGATACTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49244413	NES12669382	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31481737					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49244413	NES12669382	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:24470840 () rs orientation: forward

Symbol	Name	Function Class
Gm38410	predicted gene, 38410	1583 bp upstream