rs31481741 SNP Detail

Summary

• ID
  rs31481741
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:24470657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGGTAGAT AACAAGTGTA
  CTGGATAAGA AAAGTTAGGG CACAAACATG AGGATCTCTG TTTTATATGG GTCCTTAGAA
  GCCATATACA ACCCTGGTGT GGTTGCCCCA TCCTGTGACC CCAGCACTGA GGAGAGAGGG
  GCAGAGACCG GAGAATTTCT GGGGCTCTTT AGCTAGACAA CCTAGTTGAA TAATAGCAAG
  Y
  TTCAAGTTCA GTGACAGACT CTGTCTCAAA AAATGTGATG GAGGGTAAAG ACATCTCCTA
  TGTGCACTCA CTGGTGAGCA CACCCACATA TATGCATCAC ACACATGCCA CACATGCACT
  TAGCCTTATT CTACCAGGCA TTTTGCCCAG CACAGGGGCA CAAGGCTGTA ATCCCAGAAG
  TGTTTAGAGG GCCGAGGCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49244417	NES12669378	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31481741					SNP	T	T	T	T	T	T	T	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49244417	NES12669378	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:24470657 () rs orientation: forward

Symbol	Name	Function Class
Gm38410	predicted gene, 38410	1766 bp upstream