rs31482512 SNP Detail

Summary

• ID
  rs31482512
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115435098 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAATCTTT TGTTAGTGTC
  CTTCCACCCC CAAATATTCC TCCCATTGTA TTCTTTCTCT CTTCCTTTCT ATTAGTTGAA
  TCTATTTCCT GACAGTTTCA TACAAGTACA TAGTTCATTT GGTTACTTGC ATCCCTTCCA
  CCCTCTCTTA CTCTCCCATC CCTCCCTCTC CTCCGTACAA GTCCCTTACC AGCTCCTGGT
  R
  TATTGTTCTG TTTTGTGAAC CACTGATTTT AACCAGGGCT ATCTGTGTGT CTGCAGAACT
  CTCCTCTGGA GCCTAGCTGG CTCACCTTGG GTACACAACT GAAGACAATG ACTATCCCTT
  CCCAGAATCC ACCAGTCACT GAGAACCTTT TCCTGTCCGT GGTTAGCTGT TGATAAGCCC
  AGTGTTGTGC AATCCCGTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss45538730	mCV24998095	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss135663620	ENSMUSSNP3865199	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs31482512					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115435098 () rs orientation: forward

Symbol	Name	Function Class
Gm40124	predicted gene, 40124	within coordinates
Rr65099	regulatory region 65099	298 bp distal
Rr367536	regulatory region 367536	880 bp upstream
Rr367537	regulatory region 367537	1279 bp upstream
Tssr35264	transcription start site region 35264	61 bp downstream
Tssr35265	transcription start site region 35265	94 bp downstream