rs31482986 SNP Detail

Summary

• ID
  rs31482986
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165915540 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AAAGTCTCGG AAGATATCCC AGTTGGTGGA GTACTTACCC AGCAACTCTT ACTGGAGGCC
  CTGAGTCTGA TCCTTAGCCC AGAATAAAAC TGAGCATGGT GGTACAACCC TGTACAGCCA
  GCACTTGGAA GGTGGAAGTA GGTGTATCAG AAGTAAAAGA TCATCAGTGG CTATATAGTG
  AGTTCAAAGC CAGCCTGGAA TACATAAGAC CCTGTCTCAA AACAAAATCA TATCTATCTA
  TCTATCTATC TATCTATCTA TCTATCTATC TATCCATTCA CCCATTTATC TATTCATCCA
  Y
  CCATTTATCT ATTCATCCAT CCATTCATCC ATCCATCCAT CCATCCATGT ATCTGTTATC
  TATCTATCTA TCTATCTATC TATCTATCTA TCTATCTATC CATTCACCCA TCTATCTATT
  CATCCATCTA TTCATCCATC CATCCATCCA TGTATCTGTT ATCTATCTAT CCATCCACCC
  ATCTATCTAT TCATCCATCC ATCCATCTGT CCATCCATCC ATCCATCCAT CCATCCATCC
  ATCCATCTAT CTATTATCTA TCTATCTATC TATCTATCTA TCTATCTATC TATCTATCTA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45038402	mCV22723375	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31482986					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165915540 () rs orientation: forward

Symbol	Name	Function Class
Rr422527	regulatory region 422527	675 bp proximal
Rr422528	regulatory region 422528	1750 bp proximal