rs31484013 SNP Detail

Summary

• ID
  rs31484013
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:169725377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAACTGACA ACATAGCCTT
  GGATTGATCA TGTCTGTCCA CTCTCTTCTG AAAAGGGAAG TGGGCCCAAT TAATGTCTAG
  AATTTCTGCA TCTGATAGAA GACAATAAGC CACTTTAGGT TAATCCTCCA ACAAATGGCC
  TCTGAAAAAA ATTTTGAAGG GATCATAAGC AAACAAAGTC TTTGTAAATT AAATATATGA
  R
  TAAGCATACT ATAGTCCAAC AATCTACAGA CATGCCACAG TAGTTGTTTG AGGGGGAAAC
  AGATAATTAA TATAAAAGGA AATAAACTAA GGGTCTATAT TTGTTACTTT TTTCATTATT
  ACAACAAAAT ACCCGAGAAA TGCATTTTAA AGGAAGAAGT GTAGTCTATG AGACAGGGAA
  GACAGGGTGG CATGGGGCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49743619	NES13035835	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31484013					SNP	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49743619	NES13035835	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:169725377 () rs orientation: forward

Symbol	Name	Function Class
Gm70803	predicted gene, 70803	731 bp downstream
Gm70807	predicted gene, 70807	within coordinates