rs31484665 SNP Detail

Summary

• ID
  rs31484665
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:94892086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCT CACCGAAAGA GGGAGCTGCC
  S
  ACATTAAGCC CAGCCCCTGA CACAG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45538945	mCV24557705	ABI	CRAMUS_MOUSE	f	SNP	G	C	G	C
ss135509573	ENSMUSSNP6321894	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			C
ss320841071	CHEV_3_94788697	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31484665					SNP	G	C	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:94892086 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
D3Umi7	DNA segment, Chr 3, University of Michigan 7			within coordinates
Pi4kb	phosphatidylinositol 4-kinase beta			Coding-Synonymous
				Intron
Tssr966	transcription start site region 966			61 bp upstream