rs31484835 SNP Detail

Summary

• ID
  rs31484835
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:169724872 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCTCTCT CTCTCTCTCT
  CACACACACA CACACACACA CACAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA
  GAGAGAGAGA GAGAGTAAAC TTTAAGTTGA GAGAAGTAAG ACCAGTAACT CTGAAATGAA
  GGCTCACTCC TGTCAGCCTC AACAGCTCTC CTCTCAGAAG GAAATCCTTC TGAAGGCCAG
  R
  GATACCAAAG GGATGGATGC TTTGTTTCTG ACAAAAGGGT TATTGACATA GCTTGACTGA
  AATGGTGTAG CATTTGAATA TCTCACACCC TAGTGGGTCT ACCTAGGGCC TCCTTTTACC
  TCATTGCTCT GTGGATGCAA CCCAGTTAGA AGCTACTTAC TGCATGTGTG GATCACAGCC
  AGCTGAGCTG AGTACATCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49743621	NES13035853	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	G	G	G	G	G	G	G	G	G	G	G	A
ss146113785	ENSMUSSNP146552	ENSEMBL	ENSEMBL_Sanger	f	SNP		A						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31484835					SNP	G	A	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49743621	NES13035853	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:169724872 () rs orientation: forward

Symbol	Name	Function Class
Gm70803	predicted gene, 70803	1236 bp downstream
Gm70807	predicted gene, 70807	within coordinates