rs31484889 SNP Detail

Summary

• ID
  rs31484889
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:57764702 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGGC TTCTAGTGGG GTACCAGGTG
  M
  CAGTGTATCA GGGGCATGTG GGCAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39294860	mCV24160140	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31484889					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:57764702 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6542	CpG island 6542	1192 bp distal
Il17d	interleukin 17D	within coordinates
Rr404129	regulatory region 404129	1455 bp downstream
Tssr128966	transcription start site region 128966	1778 bp upstream
Tssr128967	transcription start site region 128967	1720 bp upstream
Tssr128968	transcription start site region 128968	1600 bp upstream