rs31488193 SNP Detail

Summary

• ID
  rs31488193
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:185153582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAAGAGGA AGGCTACTAT
  CACTAGAGAT AGAAGCTTGG TCCAAGGTTA GGGGAGGTAG CCCATGTTAT ATTCATTCTG
  TTGCCTTATA GTACTCTATG CCTAATACAT AGTGGGTTTA GTGGGTTTAT TTATTGAGAC
  AGGGTCTCAC TATGTAGACC AGGCTAACCT CAAATTCAGA GAGATCCACC TGTTGTCTTC
  R
  CTGTCTGAGT GCTGGGATTA AAGGCATGCA CCACCATTCC TGGCCACATT GCGTCTCAAT
  AAATCTGACT GGGAGAGAGT AGACTAATTT TAGCCTTACC TTTGGTGCTT GATTGGGTGT
  TTCTAGGCAG CTAGTTTATA GCTTTCTCTG GATTTATTCA TAAAAGTATC TTTTTTTGTT
  TGGTTGGTTT TTGTTTTTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45038638	mCV24553230	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss146431929	ENSMUSSNP2928201	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320175614	CHEV_1_187245264	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31488193					SNP	G	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185153582 () rs orientation: forward

Symbol	Name	Function Class
Eprs1	glutamyl-prolyl-tRNA synthetase 1	Intron
Rr425383	regulatory region 425383	319 bp distal