rs31488203 SNP Detail

Summary

• ID
  rs31488203
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:79205985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAG TGTGAGCACT CAGGGGCCAT
  K
  GCTTTGCTAC CTGAGTGAGG CCCCA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39295131	mCV24524193	ABI	CRAMUS_MOUSE	f	SNP		T	T				G
ss49326420	NES12590015	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T		G	G	T	T		G	T	T		G
ss139803544	ENSMUSSNP3170391	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T						G
ss324676653	CHEV_14_79368352	CHEVERUD	SCREENING_POP	f	SNP												G				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31488203					SNP	T	T	T	T	T	T	G	G	G	T	T	G	G	T	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49326420	NES12590015	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:79205985 () rs orientation: forward

Symbol	Name	Function Class
Gm6997	predicted gene 6997	1977 bp upstream
Tssr126779	transcription start site region 126779	1677 bp downstream
Tssr129883	transcription start site region 129883	1951 bp upstream
Vwa8	von Willebrand factor A domain containing 8	within coordinates