rs31489875 SNP Detail

Summary

• ID
  rs31489875
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128661950 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTGGAAAG ACTGGATTGT
  GGTTGAGAAT GTCTTGAACT ATAACAACCA GATTTATAAT CACACATGAT AAAAGGAATT
  CTATAGTGGA GAGAACCAGA AAGATCTGTA ATAGTGTCTT AGTGTAGTGA ACACTATTAT
  AAAGTATTTA TGTTATTGAA ACATGACATA TGTAAAAATT GCTAGTAGTT TGGAAAGTTA
  R
  TGAAACTGGC TGTAAGAGGA ATGCAGAGGA GAGACTTTTG TTATTGTTTG TAATCTTTGT
  GTGTCCTTTG TACAAATGCA TGTAATCTGT GGAAGTCAGG ACAGCCTCCA GTGTCCATTC
  TTGTCTGCTA TCTTGTTTGA GACAGAATCT CTTGTTCCAT GCTGCCTATT AAAGGTGAGT
  TGGCTTCCCA GCTTCTAAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47057956	NES11264816	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A		G	G	G	A		G
ss323536234	CHEV_10_128263137	CHEVERUD	SCREENING_POP	f	SNP											G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31489875					SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47057956	NES11264816	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128661950 () rs orientation: forward

Symbol	Name	Function Class
Sarnp	SAP domain containing ribonucleoprotein	within coordinates