rs31490843 SNP Detail

Summary

• ID
  rs31490843
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:89099244 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGGG TAAGCTAATT CCCTGTTCCT
  K
  GGTCACAGTT ATTAAATGTG GCTTG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45539783	mCV24883994	ABI	CRAMUS_MOUSE	f	SNP	G	T
ss135473843	ENSMUSSNP933935	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320836726	CHEV_3_88995859	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs31490843					SNP	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:89099244 () rs orientation: forward

Symbol	Name	Function Class
Rr367465	regulatory region 367465	1250 bp downstream
Rr579971	regulatory region 579971	1012 bp distal
Rr579972	regulatory region 579972	1586 bp proximal