rs31491538 SNP Detail

Summary

• ID
  rs31491538
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:24471640 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCAAAGAT AGCTGTGTAA
  CAAAAAGGCC ACCCCAGCAT GGGTGGTATC TTAGGCAAGC TGCATCCCTA TATCTCCCTG
  CATGGTTTAC AGACTCCTCC ATAGTCCAGA AAGTCTCTTC TTTCCAGCAG TCCTTGGGAC
  CAATAGGCTT TGTGGATCTT CTAAGTTTCA GGAACTTGCT GAGACCTGTA AGTTGTTTAT
  R
  TCTTTGGAAT AAGCAGCACT CTCCAGCCTG GGGTATTTAT GTTTACAAGA GATTGCCACA
  CGACAGGGTT TCCACCTCCA GGAGCTTTCT CTGACCATCA CAAGAACTTT ACTATGACAC
  TTACGTGCTG TGAGGCTTTG CAGGTCACAA CATTAAAATA TTTTCCTCAC CTATTCCTAG
  CCCTAGTTCC AAGCATCCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49244406	NES12669276	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31491538					SNP	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49244406	NES12669276	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:24471640 () rs orientation: forward

Symbol	Name	Function Class
Gm38410	predicted gene, 38410	783 bp upstream