rs31496675 SNP Detail

Summary

• ID
  rs31496675
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:54687878 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAG AGGCAGATAT ACTGATACAA
  R
  TTCAAGGTCA TCCTGGTCTT TGTTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39295407	mCV25247522	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss139563004	ENSMUSSNP2433649	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss324637280	CHEV_14_55069258	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31496675					SNP	A	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:54687878 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6457	CpG island 6457	877 bp distal
Gm24424	predicted gene, 24424	357 bp upstream
Rr289213	regulatory region 289213	1478 bp distal
Rr289214	regulatory region 289214	678 bp distal
Rr297196	regulatory region 297196	877 bp distal
Rr389675	regulatory region 389675	1725 bp upstream
Rr404097	regulatory region 404097	1047 bp downstream