rs31497426 SNP Detail

Summary

• ID
  rs31497426
• Variation Type
  SNP
• Alleles
  C/G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:84044525 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATCA GGCACACACT GCTGGCAGCC
  B
  GCGGATCCTA GGACAGAAGG AAAGC                                      
  
  B = C/G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	SM/J
ss45540844	mCV24157259	ABI	CRAMUS_MOUSE	f	SNP	C	C		T		C
ss51568493	NES14675131	PERLEGEN	MM_PANEL2	f	SNP			T		G		T	T		T
ss135420919	ENSMUSSNP5202002	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C				C
ss320822426	CHEV_3_83941140	CHEVERUD	SCREENING_POP	f	SNP									C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	SM/J
rs31497426					SNP	C	C	T	T	G	C	T	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51568493	NES14675131	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:84044525 () rs orientation: forward

Symbol	Name	Function Class
Mnd1	meiotic nuclear divisions 1	Intron
Rr578991	regulatory region 578991	1182 bp distal
Rr578992	regulatory region 578992	412 bp distal
Rr578993	regulatory region 578993	1337 bp proximal