rs31498622 SNP Detail

Summary

• ID
  rs31498622
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:77632608 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCTGCCCT TGGACTGAGC
  ACACTGCCTC ATGGGAAGGG GCTGTGGGTC TAGCAGTTAG GGTGGTTAGG AGGAGGGCGG
  ATGCTCTCCT ATCTCACATC CTGAAACGTG CTCTAACGTG TTGTTTTCCT TACCTATGAC
  TTTGGGACCT TCACTCTGGG ATGCCCCGTT TTCCTAGACT AATTGGCTCA TATTCATTGA
  R
  CTAAAGTCTA TATAGAACAT GAGATGGAAG AGGAAGATAA GCAGAGAGGT GGTCTTGTCC
  ATCATCCCCC CCCATCCCCC CCCAACTCAT GAGGAAGCTG TGTCTCTGAG AAGGTATGTC
  TCTTGACCAC AGGCTGGTTG CCCTCAGTAC AGCACAAAGT CTCTTGACCT GTCAGTCCAA
  TCTGGGCCAC TCCCCATCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	NZW/LacJ	PWD/PhJ
ss48057862	NES12096399	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	NZW/LacJ	PWD/PhJ
rs31498622					SNP	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48057862	NES12096399	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:77632608 () rs orientation: forward

Symbol	Name	Function Class
Apol8	apolipoprotein L 8	within coordinates
Rr505074	regulatory region 505074	735 bp proximal
Rr505075	regulatory region 505075	1990 bp proximal