rs31501842 SNP Detail

Summary

• ID
  rs31501842
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55207189 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTG AACAGGAGTC TGGCCACACA
  Y
  GAGTGTGTCT GTAGGTGGGG TTGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39296649	mCV23144780	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss139574372	ENSMUSSNP1477004	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss324641239	CHEV_14_55588569	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31501842					SNP	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55207189 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	within coordinates
Myh7	myosin, heavy polypeptide 7, cardiac muscle, beta	952 bp downstream
Rr407057	regulatory region 407057	1949 bp distal
Rr492380	regulatory region 492380	927 bp distal
Rr492381	regulatory region 492381	within coordinates
Tssr125718	transcription start site region 125718	1049 bp downstream
Tssr125719	transcription start site region 125719	957 bp downstream
Tssr125720	transcription start site region 125720	932 bp downstream
Tssr125721	transcription start site region 125721	920 bp downstream
Tssr125722	transcription start site region 125722	472 bp downstream
Tssr125723	transcription start site region 125723	430 bp downstream
Tssr125724	transcription start site region 125724	390 bp downstream
Tssr125725	transcription start site region 125725	435 bp upstream
Tssr125726	transcription start site region 125726	460 bp upstream
Tssr125727	transcription start site region 125727	493 bp upstream
Tssr125728	transcription start site region 125728	1301 bp upstream
Tssr128746	transcription start site region 128746	1757 bp upstream
Tssr128747	transcription start site region 128747	1733 bp upstream
Tssr128748	transcription start site region 128748	1689 bp upstream
Tssr128749	transcription start site region 128749	1658 bp upstream
Tssr128750	transcription start site region 128750	1636 bp upstream
Tssr128751	transcription start site region 128751	1630 bp upstream
Tssr128752	transcription start site region 128752	1571 bp upstream
Tssr128753	transcription start site region 128753	1372 bp upstream
Tssr128754	transcription start site region 128754	1302 bp upstream
Tssr128755	transcription start site region 128755	983 bp downstream
Tssr128756	transcription start site region 128756	1000 bp downstream