rs31508986 SNP Detail

Summary

• ID
  rs31508986
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136936565 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    caccactgc ttgTTTTTAT TTTTATTTAt
  ttattcattt tgagacatgc tctcatttca tagccttgct gggtttgtag gtgtgaaact
  tgcaagatgg ataaagctta ctttgaactt acagctgttc ctctgcctct gactGCTACC
  W
  GGCAGAGTGG AGTGATTTAA TGACTTTCAC AAGGTCACAG ATCAGAAGGC AAGGCAGAGG
  CAGGAATTTG AAGGCGGGCT GGTTCTGGTG TGTGAGCGAG CCCCTCACTT CTGGCCTGTC
  TAACAGGATC TCTGCTGTAG AATGCCAGGA                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45040787	mCV23233951	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A
ss145563677	ENSMUSSNP1682051	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		A
ss319997352	CHEV_1_138905404	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31508986					SNP	T	T	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136936565 () rs orientation: forward

Symbol	Name	Function Class
Gm70790	predicted gene, 70790	within coordinates
Rr419562	regulatory region 419562	1441 bp proximal
Rr419563	regulatory region 419563	1547 bp proximal