GGTCC TCAGGGCCGC GAAGGGAGGG R GAAGAGCCTG GAAGCGGCAG AAACC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|
ss46039817 | mCV24696506 | ABI | CRAMUS_MOUSE | f | SNP | A | A | G | ||
ss145571410 | ENSMUSSNP5017522 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | A | |||
ss322357787 | CHEV_7_109835520 | CHEVERUD | SCREENING_POP | f | SNP | A | A | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
LG/J |
SM/J |
||||
rs31511555 | SNP | A | A | G | A | A |
Location: Chr7:102336213 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi19528 | CpG island 19528 | within coordinates | ||||||
Gm45527 | predicted gene 45527 | 787 bp upstream | ||||||
Rr652623 | regulatory region 652623 | within coordinates | ||||||
Rr652624 | regulatory region 652624 | 254 bp proximal | ||||||
Trim68 | tripartite motif-containing 68 | within coordinates | ||||||
Tssr73953 | transcription start site region 73953 | 246 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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